Publications
2023
Baumgarten L, Pieper B, Song B, Mane S, Lempe J,...Miltos Tsiantis (2023) Pan-European study of genotypes and phenotypes in the Arabidopsis relative Cardamine hirsuta reveals how adaptation, demography, and development shape diversity patterns. PLOS Biology 21(7): e3002191. https://doi.org/10.1371/journal.pbio.3002191
Großkinsky DK, Faure JD, Gibon Y, Haslam RP, Usadel B, Zanetti F, Jonak C. The potential of integrative phenomics to harness underutilized crops for improving stress resilience. Front Plant Sci. 2023 Jun 20;14:1216337. PMID: 37409292; PMCID: PMC10318926. doi: 10.3389/fpls.2023.1216337
Guerreiro, R., Bonthala, V. S., Schlüter, U., Hoang, N. V., Triesch, S., Schranz, M. E., Weber P.M. A. & Stich B. (2023) A genomic panel for studying C3‐C4 intermediate photosynthesis in the Brassiceae tribe. Plant, Cell & Environment, 46, 3611–3627. https://doi.org/10.1111/pce.14662
Hoang NV, Sogbohossou EOD, Xiong W, Simpson CJC, Singh P, Walden N, van den Bergh E, Becker FFM, Li Z, Zhu XG, Brautigam A, Weber APM, van Haarst JC, Schijlen EGWM, Hendre PS, Van Deynze A, Achigan-Dako EG, Hibberd JM, Schranz ME. The Gynandropsis gynandra genome provides insights into whole-genome duplications and the evolution of C4 photosynthesis in Cleomaceae. Plant Cell. 2023 Apr 20;35(5):1334-1359. PMID: 36691724; PMCID: PMC10118270. https://doi.org/10.1093/plcell/koad018
Mai H-J, Baby D and Bauer P (2023) Black sheep, dark horses, and colorful dogs: a review on the current state of the Gene Ontology with respect to iron homeostasis in Arabidopsis thaliana. Front. Plant Sci. 14:1204723. doi: 10.3389/fpls.2023.1204723
Schlüter U, Bouvier JW, Guerreiro R, Malisic M, Kontny C, Westhoff P, Stich B, Weber APM. Brassicaceae display variation in efficiency of photorespiratory carbon-recapturing mechanisms. J Exp Bot. 2023 Nov 21;74(21):6631-6649. PMID: 37392176; PMCID: PMC10662225. https://doi.org/10.1093/jxb/erad250
Schmitz, G., Linstädter, A., Frank, A. S. K., Dittberner, H., Thome, J., Schrader, A., Linne von Berg, K.-H., Fulgione, A., Coupland, G., & de Meaux, J. (2023). Environmental filtering of life-history trait diversity in urban populations of Arabidopsis thaliana. Journal of Ecology, 00, 1–14. https://doi.org/10.1111/1365-2745.14211
Smith EN, van Aalst M, Tosens T, Niinemets Ü, Stich B, Morosinotto T, Alboresi A, Erb TJ, Gómez-Coronado PA, Tolleter D, Finazzi G, Curien G, Heinemann M, Ebenhöh O, Hibberd JM, Schlüter U, Sun T, Weber APM. Improving photosynthetic efficiency toward food security: Strategies, advances, and perspectives. Mol Plant. 2023 Oct 2;16(10):1547-1563. Epub 2023 Sep 1. PMID: 37660255. https://doi.org/10.1016/j.molp.2023.08.017
Wunder, J., Fulgione, A., Toräng, P., Wötzel, S., Herzog, M., Obeso, J. R., … Coupland, G. (2023). Adaptation of perennial flowering phenology across the European range of Arabis alpina. Proceedings of the Royal Society B: Biological Sciences, 290(2011). https://doi.org/10.1098/rspb.2023.1401
2024
Abdrabbou, M. M., Babaki, M., Boissonnet, T., Bortolomeazzi, M., Dahms, E., Fuchs, V. A. F., Hoevels, M., Kandpal, N., Möhl, C., Moore, J. A., Schauss, A., Schrader, A., Stöter, T., Thönnißen, J., Valencia-S., M., Weil, H. L., Wendt, J., & Zentis, P. (2024). NFDI4Bioimage - TA3-Hackathon - UoC-2023 (Cologne-Hackathon-2023, GitHub repository) (v1.0.1). Zenodo. https://doi.org/10.5281/zenodo.10617006
Croce R, Carmo-Silva E, Cho YB, Ermakova M, Harbinson J, Lawson T, McCormick AJ, Niyogi KK, Ort DR, Patel-Tupper D, Pesaresi P, Raines C, Weber APM, Zhu XG. Perspectives on improving photosynthesis to increase crop yield. Plant Cell. 2024 Oct 3;36(10):3944-3973. PMID: 38701340; PMCID: PMC11449117. https://doi.org/10.1093/plcell/koae132
Nicholas de Jager, Varsa Shukla, Anna Koprivova, Martin Lyčka, Lorina Bilalli, Yanrong You, Jürgen Zeier, Stanislav Kopriva, Daniela Ristova, Traits linked to natural variation of sulfur content in Arabidopsis thaliana, Journal of Experimental Botany, Volume 75, Issue 3, 2 February 2024, Pages 1036–1050, https://doi.org/10.1093/jxb/erad401
Qichao Lian, Bruno Huettel, Birgit Walkemeier, Baptiste Mayjonade, Céline Lopez-Roques, Lisa Gil, Fabrice Roux, Korbinian Schneeberger & Raphael Mercier. A pan-genome of 69 Arabidopsis thaliana accessions reveals a conserved genome structure throughout the global species range. Nat Genet (2024). https://doi.org/10.1038/s41588-024-01715-9.
Triesch S, Denton AK, Bouvier JW, Buchmann JP, Reichel-Deland V, Guerreiro RNFM, Busch N, Schlüter U, Stich B, Kelly S, Weber APM. Transposable elements contribute to the establishment of the glycine shuttle in Brassicaceae species. Plant Biol (Stuttg). 2024 Mar;26(2):270-281. Epub 2024 Jan 3. PMID: 38168881. https://doi.org/10.1111/plb.13601
Xin-Min Li, Hannah Jenke, Sören Strauss, Christos Bazakos, Gabriella Mosca, Rena Lymbouridou, Daniel Kierzkowski, Ulla Neumann, Purva Naik, Peter Huijser, Stefan Laurent, Richard S. Smith, Adam Runions, Miltos Tsiantis, Cell-cycle-linked growth reprogramming encodes developmental time into leaf morphogenesis, Current Biology, Volume 34, Issue 3, 2024, Pages 541-556.e15, ISSN 0960-9822, https://doi.org/10.1016/j.cub.2023.12.050.
Xin-Min Li, Hannah Jenke, Sören Strauss, Yi Wang, Neha Bhatia, Daniel Kierzkowski, Rena Lymbouridou, Peter Huijser, Richard S. Smith, Adam Runions, Miltos Tsiantis. Age-associated growth control modifies leaf proximodistal symmetry and enabled leaf shape diversification, Current Biology (2024), https://doi.org/10.1016/j.cub.2024.07.068
Preprints
Matthew T. Parker, Samija Amar, José A. Campoy, Kristin Krause, Sergio Tusso, Magdalena Marek, Bruno Huettel, Korbinian Schneeberger; Expression quantitative trait locus mapping in recombinant gametes using single nucleus RNA sequencing; bioRxiv 2024.08.02.606310; doi: https://doi.org/10.1101/2024.08.02.606310
Prizes and Awards
Poster prize to Justine Floret May 2023
Justine Floret was awarded the 1st prize for the best student poster presentation at the PopBio 2023 conference in Stuttgart.
Poster title: The urban niche of Arabidopsis thaliana
Klaus Liebrecht Prize to Lisa Mahdi April 2024
Lisa Mahdi received the Klaus Liebrecht Prize for her outstanding research on elucidating the molecular interactions between a plant and its microbiota